### Academic Progress and Milestones

__Course Requirements__

First-year students are required to register for three courses per quarter for a total of nine (9) graduate courses during their first year in the program. They are required to follow the analytical sequence:

Applied Dynamical Systems (CAAM 31410),

Applied Functional Analysis (CAAM 31440),

Partial Differential Equations (CAAM 31220),

as well as the computational sequence:

Mathematical Computation I: Matrix Computation (CAAM 30900),

Mathematical Computation II: Optimization (CAAM 31020 or CAAM 31015),

Applied Approximation Theory (CAAM 31050).

They should receive a grade of B or above in each course and have an average of B+ or above in each sequence. The remaining three courses may be chosen freely from CAM-related graduate programs at The University of Chicago. Approval for the three electives is required from the first-year PhD student advisor.

Graduate students are required to complete a third sequence during their first three years in the program. The sequence is composed of

Machine Learning (CAAM 37710)

or equivalent and two classes from the following list:

Measure Theoretic Probability (STAT 381, STAT 383, STAT 385),

Data Assimilation and Inverse Problems,

Variational Methods in Image Processing,

Monte Carlo Simulations,

Numerical PDE,

Fast Algorithms,

Algorithms for Massive Datasets,

Computational Neuroscience (CAAM 42610),

Stochastic processes in gene regulation (CAAM 35420).

Additional graduate courses in the PSD may be considered for the sequence with approval from CCAM. Students should receive a grade of B or above in each course and have an average of B+ or above in the sequence. The above list will be updated based on course availability. Course substitutions based on specific research interests and funding requirements are possible and need approval from the student’s PhD advisor and CCAM leadership.

Students who do not complete these requirements as noted above may be placed on academic probation.

Graduate students need to complete at least twelve (12) CAM-related graduate courses to graduate.

__Qualifying Exams__

Graduate students take written qualifying exams at the end of their first year, typically in the month of June. They need to take two out of three exams from the analytical sequence and two out of three exams from the computational sequence.

Students failing all four exams may be dismissed from the program at the end of their first year.

Students failing between one and three exams will need to retake those same exams the following year unless CCAM provides an alternative path. Students failing any exam for a second time may be dismissed from the program at the end of their second year.

__Thesis Advisor and Thesis Committee__

Students are encouraged to identify a potential PhD advisor at the end of their first year to engage/enroll in a summer Reading & Research course. If such an advisor cannot be identified, students are required to present a plan for their first-year summer quarter that needs approval from CCAM.

PhD students are free to change PhD advisors during their enrollment in the program. PhD advisors are free to discontinue working with a PhD student and then cease to be the student’s advisor should the collaboration not meet expectations.

Students are required to form a thesis committee once they have a designated advisor. The committee will first meet (in person) at the end of the student’s second year. If such a thesis committee cannot be formed, students need to present a plan for their future in the program that needs approval from CCAM.

The thesis committee is composed of a minimum of three researchers physically present in Chicago. At least two members need to be affiliated with CCAM. Thesis committees report to CCAM on the student progress at the end of every academic year.

Students are expected to present progress in their PhD work to the thesis committee at the end of year 3, and again at the end of year 4.

Our expectation is for students to graduate at the end of their fifth year in the program. Staying in the program for a sixth year requires approval by CCAM. Students would need to petition by the end of Winter quarter of their fifth year, provide a research plan for completing their degree in a timely manner, and receive approval from their PhD advisor.

__Proposal Presentation and Admission to Candidacy__

No later than the end of Autumn Quarter of the fourth year, students should have scheduled and completed a proposal presentation to their committee, in order to be advanced to candidacy. The proposal presentation is typically an hourlong meeting that begins with a 30-minute presentation by the student, followed by a question and discussion period with the committee. The proposal meeting will be scheduled by the student and his or her committee and reported to the CAM student affairs administrator. Acceptance of the proposal by the Dissertation Committee is a formal requirement of CAM’s Ph.D. program; all committee members must sign the form approving the proposal. After a successful proposal presentation, the student will be formally admitted to candidacy for the Ph.D. degree. By University rules, the dissertation defense cannot occur earlier than 8 months after admission to candidacy, and the student should keep this in mind when scheduling both the proposal presentation and the defense.

Following advancement to candidacy, during each year that the student remains, the student is required to have a yearly meeting with the dissertation committee leading up to the final thesis defense.

__Dissertation Defense__

The Ph.D. degree will be awarded following a successful defense and the electronic submission of the final version of the dissertation to the University's Dissertation Office. In this process, a number of University and Department deadlines have to be obeyed. Listed in reverse order, the steps are:

*a) Submission of Final Version of Dissertation:*

The deadline is set by the University and is generally on a Friday in the 6th or 7th week of the quarter when the degree will be awarded. See:

- Information for Ph.D. Students: https://www.lib.uchicago.edu/research/scholar/phd/students/
- Dissertation Deadlines: https://www.lib.uchicago.edu/research/scholar/phd/students/dissertation-deadlines/
- Dissertation Templates (LaTeX and Lyx): https://wiki.uchicago.edu/display/DissertationTemplate/Home

for this deadline as well as guidelines for the formatting of dissertations.

** b) Dissertation Defense**:

The thesis defense will be an open seminar announced to the department. Following the regular question-and-answer session, the committee will remain, together with any interested faculty, and continue questioning the candidate. The decision on the thesis will then be reached in a closed meeting of the faculty present. The defense is to be scheduled at least two weeks before the University deadline indicated in point (a). A final draft of the dissertation must be made available to the entire faculty 8 days before the dissertation presentation.

*c) Committee Approval of Scheduled Defense:*A draft of the dissertation should be distributed to the members of the dissertation committee no later than five weeks before the dissertation defense. At least four weeks before the defense, the student must file a departmental form in the Department office, signed by all members of the dissertation committee, indicating that the student can reasonably expect to defend the thesis within four weeks.

These rules delineate the minimum level of involvement of the dissertation committee. We strongly recommend that students set up their committees early and that they interact regularly with the members of their committees once they are established. In particular, we strongly recommend that those students wishing to complete the degree before September schedule their defense before the Summer Quarter, else unanticipated committee requirements may lead to the degree being delayed to the Winter Quarter.

Students are required to complete the online Responsible Conduct of Research (RCR) training through the CITI program by the end of their first quarter of enrollment.

Students with questions may contact Jonathan Rodriguez (Student Affairs Administrator), Bahareh Lampert (Dean of Students in the Physical Sciences Division), or Amanda Young (Associate Director, Graduate Student Affairs) in UChicagoGRAD.